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Sample Data Sets to demonstrate MapMan


Hordeum vulgare


Grain maturation and germination


   

N. Sreenivasulu et al. (2008) Barley Grain Maturation and Germination: Metabolic Pathway and Regulatory Network Commonalities and Differences Highlighted by New MapMan/PageMan Profiling Tools. Plant Physiol. 146:1738-1758. (PubMed)


Medicago trunculata


Defense-associated gene expression

   

Tellström, V., B. Usadel, O. Thimm, M. Stitt, H. Küster and K. Niehaus (2007) The lipopolysaccharide of Sinorhizobium meliloti suppresses defense-associated gene expression in cell cultures of the host plant Medicago truncatula. Plant Physiol. 143(2): 825-37. (PubMed)


Arabidopsis thaliana


Diurnal Cycle:

    Arabidopsis thaliana rosettes were harvested at six different time points during 12-h-light/12-h-dark treatments to investigate changes in gene expression and metabolite changes of the starchless phosphoglucomutase (pgm) mutant compared to Col-0 wildtype.
Bläsing et al. Plant Cell. 2005 17(12):3257-81


Extended night:

    Investigation of the response of Arabidopsis rosettes to low sugar:
one investigates the response of extension of the night, and the other compares wildtype Col-0 and the starchless pgm mutant at the end of the night.


N-starvation and nitrate re-addition:

    Investigation of the response of Arabidopsis seedlings to N-starvation and nitrate re-addition.
Scheible et al. (2004) Plant Physiology 136(1): 2483-2499.


UV-B stress:

    Investigation of the response of Arabidopsis seedlings (roots and green parts) to UVB stress.
For more information and data download go to TAIR website.


Cold stress:

    Investigation of the response of Arabidopsis seedlings (roots and green parts) to cold stress.
For more information and data download go to TAIR website.


Drought stress:

    Investigation of the response of Arabidopsis seedlings (roots and green parts) to drought stress.
For more information and data download go to TAIR website.


Genotoxic stress:

    Investigation of the response of Arabidopsis seedlings (roots and green parts) to genotoxic stress.
For more information and data download go to TAIR website.


Heat stress:

    Investigation of the response of Arabidopsis seedlings (roots and green parts) to heat stress.
For more information and data download go to TAIR website.


Osmotic stress:

    Investigation of the response of Arabidopsis seedlings (roots and green parts) to osmotic stress.
For more information and data download go to TAIR website.


Oxidative stress:

    Investigation of the response of Arabidopsis seedlings (roots and green parts) to oxidative stress.
For more information and data download go to TAIR website.


Salt stress:

    Investigation of the response of Arabidopsis seedlings (roots and green parts) to salt stress.
For more information and data download go to TAIR website.


Wound stress:

    Investigation of the response of Arabidopsis seedlings (roots and green parts) to wound stress.
For more information and data download go to TAIR website.


CO2_treatment:

    Identification of genes controlling stomatal number in response to rising atmospheric carbon dioxide levels.


Ethylene:

    Ethylene induced hyponastic growth.


Mutant cov

    Role of COV in vascular patterning.


Analysis of the NO3-response pathway

    Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots


Gene-knock-out acn1-2

    Investigating the links between organic acid and carbohydrate regulation of gene expression


Control of lignification

    Investigation of lignification


Plant Programmed Cell Death

    Genes Involved in Plant Programmed Cell Death (PCD)


Transcriptome analysis of glyoxylate cycle knock-out mutants in early stages of seedling development

    Genes Involved in Plant Programmed Cell Death (PCD)

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